Package: easysurv 2.0.3

Niall Davison

easysurv: Simplify Survival Data Analysis and Model Fitting

Inspect survival data, plot Kaplan-Meier curves, assess the proportional hazards assumption, fit parametric survival models, predict and plot survival and hazards, and export the outputs to 'Excel'. A simple interface for fitting survival models using flexsurv::flexsurvreg(), flexsurv::flexsurvspline(), flexsurvcure::flexsurvcure(), and survival::survreg().

Authors:Niall Davison [aut, cre], Brad Kievit [aut], Maple Health Group, LLC [cph, fnd]

easysurv_2.0.3.tar.gz
easysurv_2.0.3.zip(r-4.7-any)easysurv_2.0.3.zip(r-4.6-any)easysurv_2.0.3.zip(r-4.5-any)
easysurv_2.0.3.tgz(r-4.6-any)easysurv_2.0.3.tgz(r-4.5-any)
easysurv_2.0.3.tar.gz(r-4.7-any)easysurv_2.0.3.tar.gz(r-4.6-any)
easysurv_2.0.3.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
easysurv/json (API)

# Install 'easysurv' in R:

install.packages('easysurv', repos = c('https://maple-health-group.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/maple-health-group/easysurv/issues

Pkgdown/docs site:https://maple-health-group.github.io

Datasets:

easy_adtte - Formatted Copy of ggsurvfit::adtte
easy_bc - Formatted Copy of flexsurv::bc
easy_lung - Formatted Copy of survival::lung

On CRAN:

5.00 score 5 stars 7 scripts 348 downloads 15 exports 143 dependencies

Last updated from:738956e45c. Checks:9 OK. Indexed: yes.

Target	Result	Time
linux-devel	OK	292
source / vignettes	OK	291
linux-release	OK	325
macos-release	OK	258
macos-oldrel	OK	275
windows-devel	OK	194
windows-release	OK	183
windows-oldrel	OK	182
wasm-release	OK	204

Exports:fit_models get_km get_schoenfeld inspect_surv_data plot_cloglog plot_km plot_schoenfeld predict_and_plot quick_start quick_start2 quick_start3 test_ph theme_easysurv theme_risktable_easysurv write_to_xl

Dependencies:askpass assertthat backports base64enc bbmle bdsmatrix boot broom bshazard bslib cachem censored cli clipr cmprsk codetools cpp11 crayon credentials crosstalk curl data.table desc deSolve diagram dials DiceDesign digest dplyr Epi etm evaluate farver fastGHQuad fastmap flexsurv flexsurvcure fontawesome Formula fs future future.apply generics gert ggplot2 ggsurvfit gitcreds globals glue gtable hardhat highr htmltools htmlwidgets httr httr2 ini inum isoband jquerylib jsonlite KernSmooth knitr labeling later lattice lava lazyeval libcoin lifecycle listenv lsoda magrittr MASS Matrix mboost memoise mgcv mime mstate muhaz mvtnorm nlme nnls numDeriv openssl openxlsx otel pak parallelly parsnip partykit patchwork pillar pkgconfig plotly plyr prettyunits prodlim progressr promises purrr quadprog R6 rappdirs RColorBrewer Rcpp RcppArmadillo rlang rmarkdown rpart rprojroot rstpm2 rstudioapi S7 sandwich sass scales sfd shape sparsevctrs SQUAREM stabs statmod stringi stringr strucchange survival sys tibble tidyr tidyselect tinytex usethis utf8 vctrs viridisLite whisker withr xfun yaml zip zoo

Explore easysurv

Rendered fromeasysurv.Rmdusingknitr::rmarkdown

Last update: 2024-06-20
Started: 2024-06-19

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Formatted Copy of ggsurvfit::adtte	easy_adtte
Formatted Copy of flexsurv::bc	easy_bc
Formatted Copy of survival::lung	easy_lung
Fit Survival Models	fit_models
Generate Kaplan-Meier estimates	get_km
Extract Schoenfeld Residuals	get_schoenfeld
Inspect Survival Data	inspect_surv_data
Cumulative Log Log Plot	plot_cloglog
Plot Kaplan-Meier Data	plot_km
Plot Schoenfeld Residuals	plot_schoenfeld
Plot method for 'fit_models'	plot.fit_models
Predict and Plot Fitted Models	predict_and_plot
Predict method for 'fit_models'	predict.fit_models
Print methods for 'fit_models()'	print.fit_models
Print methods for 'get_km()'	print.get_km
Print methods for 'inspect_surv_data()'	print.inspect_surv_data
Print methods for 'predict_and_plot()'	print.predict_and_plot
Print methods for 'test_ph()'	print.test_ph
Launch Example Survival Analysis Script using the easy_lung Data Set	quick_start
Launch Example Survival Analysis Script using the easy_bc Data Set	quick_start2
Launch Example Survival Analysis Script using the easy_adtte Data Set	quick_start3
Test Proportional Hazards Assumption	test_ph
Plot Theme for easysurv Survival and Hazard Plots	theme_easysurv
Plot Theme for easysurv Risk Tables	theme_risktable_easysurv
Export easysurv output to Excel via 'openxlsx'	write_to_xl